Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Gm5867-201ENSMUST00000063197 592 ntBASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Ddx49Q4FZF3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Birc2-201ENSMUST00000054878 378 ntBASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx49Q4FZF3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 Gm28659-201ENSMUST00000188013 759 ntBASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.95■□□□□ 0.78
Ddx49Q4FZF3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx49Q4FZF3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Gm5864-201ENSMUST00000202263 970 ntBASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx49Q4FZF3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.92■□□□□ 0.78
Ddx49Q4FZF3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms