Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BC051142Q3V0M8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BC051142Q3V0M8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BC051142Q3V0M8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BC051142Q3V0M8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BC051142Q3V0M8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.41■□□□□ 0.54
BC051142Q3V0M8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BC051142Q3V0M8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BC051142Q3V0M8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BC051142Q3V0M8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BC051142Q3V0M8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BC051142Q3V0M8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BC051142Q3V0M8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BC051142Q3V0M8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
BC051142Q3V0M8 Gm4974-201ENSMUST00000209974 875 ntBASIC18.39■□□□□ 0.53
BC051142Q3V0M8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BC051142Q3V0M8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BC051142Q3V0M8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BC051142Q3V0M8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BC051142Q3V0M8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Gm15378-201ENSMUST00000121894 207 ntBASIC18.37■□□□□ 0.53
BC051142Q3V0M8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BC051142Q3V0M8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Gm13168-201ENSMUST00000121771 632 ntBASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Gm20760-201ENSMUST00000179197 648 ntBASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC051142Q3V0M8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BC051142Q3V0M8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BC051142Q3V0M8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BC051142Q3V0M8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BC051142Q3V0M8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.34■□□□□ 0.53
BC051142Q3V0M8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BC051142Q3V0M8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BC051142Q3V0M8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BC051142Q3V0M8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms