Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Znf48Q3US17 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Znf48Q3US17 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Znf48Q3US17 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Znf48Q3US17 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Znf48Q3US17 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Znf48Q3US17 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Znf48Q3US17 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Znf48Q3US17 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Znf48Q3US17 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.21□□□□□ -0.14
Znf48Q3US17 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Znf48Q3US17 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Znf48Q3US17 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Znf48Q3US17 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.2□□□□□ -0.14
Znf48Q3US17 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Znf48Q3US17 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.2□□□□□ -0.14
Znf48Q3US17 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.2□□□□□ -0.14
Znf48Q3US17 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.2□□□□□ -0.14
Znf48Q3US17 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Znf48Q3US17 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.2□□□□□ -0.14
Znf48Q3US17 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Znf48Q3US17 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Znf48Q3US17 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Znf48Q3US17 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Znf48Q3US17 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Znf48Q3US17 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Znf48Q3US17 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Gm6659-201ENSMUST00000174752 547 ntBASIC14.19□□□□□ -0.14
Znf48Q3US17 Gm27741-201ENSMUST00000185060 237 ntBASIC14.19□□□□□ -0.14
Znf48Q3US17 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.19□□□□□ -0.14
Znf48Q3US17 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Znf48Q3US17 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Znf48Q3US17 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Znf48Q3US17 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Znf48Q3US17 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.18□□□□□ -0.14
Znf48Q3US17 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.18□□□□□ -0.14
Znf48Q3US17 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Znf48Q3US17 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Znf48Q3US17 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Znf48Q3US17 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms