Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Gm37055-201ENSMUST00000191866 133 ntBASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Gm3375-201ENSMUST00000203929 796 ntBASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Gm37025-201ENSMUST00000195159 829 ntBASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Gm10252-201ENSMUST00000209541 832 ntBASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Gm5417-201ENSMUST00000079706 384 ntBASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp560Q3URI6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.23■□□□□ 0.35
Zfp560Q3URI6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.22■□□□□ 0.35
Zfp560Q3URI6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zfp560Q3URI6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Zfp560Q3URI6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Zfp560Q3URI6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zfp560Q3URI6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zfp560Q3URI6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Zfp560Q3URI6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zfp560Q3URI6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms