Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Usp30Q3UN04 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.29■□□□□ 0.36
Usp30Q3UN04 Gm18958-201ENSMUST00000174258 762 ntBASIC17.29■□□□□ 0.36
Usp30Q3UN04 Gm27704-201ENSMUST00000185094 107 ntBASIC17.29■□□□□ 0.36
Usp30Q3UN04 Ank2-226ENSMUST00000189368 339 ntBASIC17.29■□□□□ 0.36
Usp30Q3UN04 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Actl10-202ENSMUST00000226583 1501 ntBASIC17.29■□□□□ 0.36
Usp30Q3UN04 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp30Q3UN04 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp30Q3UN04 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Usp30Q3UN04 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp30Q3UN04 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp30Q3UN04 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp30Q3UN04 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp30Q3UN04 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp30Q3UN04 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp30Q3UN04 Gm9103-201ENSMUST00000119371 405 ntBASIC17.27■□□□□ 0.36
Usp30Q3UN04 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp30Q3UN04 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp30Q3UN04 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp30Q3UN04 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp30Q3UN04 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Usp30Q3UN04 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.26■□□□□ 0.35
Usp30Q3UN04 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.26■□□□□ 0.35
Usp30Q3UN04 Gm17808-201ENSMUST00000200859 894 ntBASIC17.26■□□□□ 0.35
Usp30Q3UN04 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Gm10566-201ENSMUST00000086739 996 ntBASIC17.26■□□□□ 0.35
Usp30Q3UN04 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Usp30Q3UN04 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp30Q3UN04 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp30Q3UN04 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp30Q3UN04 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp30Q3UN04 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp30Q3UN04 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp30Q3UN04 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp30Q3UN04 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp30Q3UN04 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Usp30Q3UN04 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp30Q3UN04 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Usp30Q3UN04 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms