Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Naf1Q3UMQ8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Gm18101-201ENSMUST00000215769 548 ntBASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.48■□□□□ 0.39
Naf1Q3UMQ8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Naf1Q3UMQ8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Naf1Q3UMQ8 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.46■□□□□ 0.38
Naf1Q3UMQ8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Gm13474-201ENSMUST00000122466 815 ntBASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Gm6345-202ENSMUST00000180900 204 ntBASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Naf1Q3UMQ8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Naf1Q3UMQ8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Naf1Q3UMQ8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Naf1Q3UMQ8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Naf1Q3UMQ8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.44■□□□□ 0.38
Naf1Q3UMQ8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.44■□□□□ 0.38
Naf1Q3UMQ8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Naf1Q3UMQ8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Naf1Q3UMQ8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Naf1Q3UMQ8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Naf1Q3UMQ8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms