Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf2Q3UAW9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.23■□□□□ 0.19
Brf2Q3UAW9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf2Q3UAW9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf2Q3UAW9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Brf2Q3UAW9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf2Q3UAW9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf2Q3UAW9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Gm43183-201ENSMUST00000200632 547 ntBASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf2Q3UAW9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Gm15378-201ENSMUST00000121894 207 ntBASIC16.21■□□□□ 0.19
Brf2Q3UAW9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Gm10517-202ENSMUST00000192970 758 ntBASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf2Q3UAW9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Brf2Q3UAW9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Brf2Q3UAW9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Brf2Q3UAW9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Brf2Q3UAW9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Brf2Q3UAW9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Gm20760-201ENSMUST00000179197 648 ntBASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.19■□□□□ 0.18
Brf2Q3UAW9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Brf2Q3UAW9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms