Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp25Q3U435 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Mmp25Q3U435 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp25Q3U435 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp25Q3U435 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.2■□□□□ 0.18
Mmp25Q3U435 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Mmp25Q3U435 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.2■□□□□ 0.18
Mmp25Q3U435 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp25Q3U435 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Mmp25Q3U435 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp25Q3U435 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Gm2274-201ENSMUST00000184539 609 ntBASIC16.19■□□□□ 0.18
Mmp25Q3U435 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp25Q3U435 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.19■□□□□ 0.18
Mmp25Q3U435 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Rarb-207ENSMUST00000225921 2756 ntBASIC16.19■□□□□ 0.18
Mmp25Q3U435 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.19■□□□□ 0.18
Mmp25Q3U435 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp25Q3U435 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp25Q3U435 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Gm7889-201ENSMUST00000185591 958 ntBASIC16.17■□□□□ 0.18
Mmp25Q3U435 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp25Q3U435 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp25Q3U435 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms