Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cul4aQ3TCH7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cul4aQ3TCH7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cul4aQ3TCH7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cul4aQ3TCH7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cul4aQ3TCH7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.08■□□□□ 0.49
Cul4aQ3TCH7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cul4aQ3TCH7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cul4aQ3TCH7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Cul4aQ3TCH7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cul4aQ3TCH7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cul4aQ3TCH7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cul4aQ3TCH7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.08■□□□□ 0.48
Cul4aQ3TCH7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cul4aQ3TCH7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cul4aQ3TCH7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cul4aQ3TCH7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Gm13158-201ENSMUST00000122007 736 ntBASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cul4aQ3TCH7 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cul4aQ3TCH7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Gm42545-201ENSMUST00000202755 922 ntBASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cul4aQ3TCH7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms