Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim63Q38HM4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim63Q38HM4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.28□□□□□ -0.12
Trim63Q38HM4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trim63Q38HM4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim63Q38HM4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim63Q38HM4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim63Q38HM4 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.27□□□□□ -0.12
Trim63Q38HM4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim63Q38HM4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trim63Q38HM4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim63Q38HM4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim63Q38HM4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim63Q38HM4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.27□□□□□ -0.12
Trim63Q38HM4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.27□□□□□ -0.13
Trim63Q38HM4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim63Q38HM4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.26□□□□□ -0.13
Trim63Q38HM4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms