Protein–RNA interactions for Protein: Q01405

Sec23a, Protein transport protein Sec23A, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec23aQ01405 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sec23aQ01405 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sec23aQ01405 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sec23aQ01405 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sec23aQ01405 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sec23aQ01405 Gm13474-201ENSMUST00000122466 815 ntBASIC19.76■□□□□ 0.75
Sec23aQ01405 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sec23aQ01405 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sec23aQ01405 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sec23aQ01405 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sec23aQ01405 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sec23aQ01405 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sec23aQ01405 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sec23aQ01405 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Sec23aQ01405 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.75■□□□□ 0.75
Sec23aQ01405 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sec23aQ01405 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sec23aQ01405 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.75■□□□□ 0.75
Sec23aQ01405 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.75■□□□□ 0.75
Sec23aQ01405 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sec23aQ01405 Gm18958-201ENSMUST00000174258 762 ntBASIC19.75■□□□□ 0.75
Sec23aQ01405 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec23aQ01405 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sec23aQ01405 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec23aQ01405 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec23aQ01405 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sec23aQ01405 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sec23aQ01405 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sec23aQ01405 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sec23aQ01405 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.74■□□□□ 0.75
Sec23aQ01405 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sec23aQ01405 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.74■□□□□ 0.75
Sec23aQ01405 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sec23aQ01405 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sec23aQ01405 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sec23aQ01405 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sec23aQ01405 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sec23aQ01405 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sec23aQ01405 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.74■□□□□ 0.75
Sec23aQ01405 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec23aQ01405 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.73■□□□□ 0.75
Sec23aQ01405 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.73■□□□□ 0.75
Sec23aQ01405 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec23aQ01405 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec23aQ01405 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.73■□□□□ 0.75
Sec23aQ01405 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.73■□□□□ 0.75
Sec23aQ01405 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.73■□□□□ 0.75
Sec23aQ01405 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.73■□□□□ 0.75
Sec23aQ01405 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Sec23aQ01405 Gm10566-201ENSMUST00000086739 996 ntBASIC19.73■□□□□ 0.75
Sec23aQ01405 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Sec23aQ01405 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec23aQ01405 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec23aQ01405 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sec23aQ01405 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Sec23aQ01405 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sec23aQ01405 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sec23aQ01405 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sec23aQ01405 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sec23aQ01405 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sec23aQ01405 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sec23aQ01405 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sec23aQ01405 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sec23aQ01405 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Sec23aQ01405 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sec23aQ01405 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.71■□□□□ 0.75
Sec23aQ01405 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sec23aQ01405 Actl10-202ENSMUST00000226583 1501 ntBASIC19.71■□□□□ 0.75
Sec23aQ01405 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.71■□□□□ 0.75
Sec23aQ01405 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sec23aQ01405 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Mir1668-201ENSMUST00000184114 107 ntBASIC19.71■□□□□ 0.75
Sec23aQ01405 Gm7213-201ENSMUST00000215977 950 ntBASIC19.71■□□□□ 0.75
Sec23aQ01405 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.71■□□□□ 0.75
Sec23aQ01405 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sec23aQ01405 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
Sec23aQ01405 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.71■□□□□ 0.75
Sec23aQ01405 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec23aQ01405 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sec23aQ01405 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sec23aQ01405 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Sec23aQ01405 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sec23aQ01405 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sec23aQ01405 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sec23aQ01405 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sec23aQ01405 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sec23aQ01405 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sec23aQ01405 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms