Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Trim43cP86449 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim43cP86449 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Trim43cP86449 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim43cP86449 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43cP86449 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43cP86449 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43cP86449 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim43cP86449 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim43cP86449 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43cP86449 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43cP86449 Il3ra-202ENSMUST00000223589 738 ntBASIC18.71■□□□□ 0.59
Trim43cP86449 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43cP86449 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43cP86449 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim43cP86449 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43cP86449 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43cP86449 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43cP86449 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim43cP86449 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43cP86449 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
Trim43cP86449 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43cP86449 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Trim43cP86449 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim43cP86449 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trim43cP86449 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim43cP86449 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim43cP86449 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43cP86449 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.7■□□□□ 0.58
Trim43cP86449 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43cP86449 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43cP86449 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.7■□□□□ 0.58
Trim43cP86449 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43cP86449 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43cP86449 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43cP86449 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43cP86449 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43cP86449 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43cP86449 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim43cP86449 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43cP86449 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43cP86449 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43cP86449 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim43cP86449 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43cP86449 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43cP86449 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43cP86449 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.69■□□□□ 0.58
Trim43cP86449 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43cP86449 Gm9731-201ENSMUST00000209480 747 ntBASIC18.69■□□□□ 0.58
Trim43cP86449 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43cP86449 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43cP86449 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim43cP86449 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43cP86449 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43cP86449 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43cP86449 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim43cP86449 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim43cP86449 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.68■□□□□ 0.58
Trim43cP86449 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim43cP86449 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.68■□□□□ 0.58
Trim43cP86449 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.68■□□□□ 0.58
Trim43cP86449 Gm7791-201ENSMUST00000219066 539 ntBASIC18.68■□□□□ 0.58
Trim43cP86449 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43cP86449 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43cP86449 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43cP86449 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43cP86449 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43cP86449 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43cP86449 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43cP86449 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim43cP86449 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43cP86449 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43cP86449 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43cP86449 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43cP86449 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43cP86449 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43cP86449 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim43cP86449 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43cP86449 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim43cP86449 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43cP86449 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43cP86449 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43cP86449 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43cP86449 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43cP86449 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim43cP86449 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43cP86449 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43cP86449 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43cP86449 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim43cP86449 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.66■□□□□ 0.58
Trim43cP86449 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43cP86449 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms