Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm17661-201ENSMUST00000170317 270 ntBASIC15.33■□□□□ 0.04
H3f3aP84244 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.33■□□□□ 0.04
H3f3aP84244 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3aP84244 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3aP84244 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
H3f3aP84244 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
H3f3aP84244 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3aP84244 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3aP84244 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.33■□□□□ 0.04
H3f3aP84244 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3aP84244 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
H3f3aP84244 Gm7638-201ENSMUST00000121348 967 ntBASIC15.32■□□□□ 0.04
H3f3aP84244 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
H3f3aP84244 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.32■□□□□ 0.04
H3f3aP84244 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
H3f3aP84244 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
H3f3aP84244 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.32■□□□□ 0.04
H3f3aP84244 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3aP84244 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
H3f3aP84244 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.31■□□□□ 0.04
H3f3aP84244 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.31■□□□□ 0.04
H3f3aP84244 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
H3f3aP84244 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
H3f3aP84244 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
H3f3aP84244 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3aP84244 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3aP84244 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.3■□□□□ 0.04
H3f3aP84244 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3aP84244 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.3■□□□□ 0.04
H3f3aP84244 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.3■□□□□ 0.04
H3f3aP84244 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H3f3aP84244 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3aP84244 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3aP84244 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.3■□□□□ 0.04
H3f3aP84244 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.3■□□□□ 0.04
H3f3aP84244 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3aP84244 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3aP84244 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3aP84244 Gm5417-201ENSMUST00000079706 384 ntBASIC15.3■□□□□ 0.04
H3f3aP84244 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H3f3aP84244 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3aP84244 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3aP84244 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3aP84244 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.29■□□□□ 0.04
H3f3aP84244 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.29■□□□□ 0.04
H3f3aP84244 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
H3f3aP84244 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.29■□□□□ 0.04
H3f3aP84244 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
H3f3aP84244 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.29■□□□□ 0.04
H3f3aP84244 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
H3f3aP84244 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.29■□□□□ 0.04
H3f3aP84244 Gm9731-201ENSMUST00000209480 747 ntBASIC15.29■□□□□ 0.04
H3f3aP84244 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.29■□□□□ 0.04
H3f3aP84244 Il3ra-202ENSMUST00000223589 738 ntBASIC15.29■□□□□ 0.04
H3f3aP84244 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.29■□□□□ 0.04
H3f3aP84244 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H3f3aP84244 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
H3f3aP84244 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3aP84244 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
H3f3aP84244 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms