Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
SgcbP82349 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.37■□□□□ 0.05
SgcbP82349 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.37■□□□□ 0.05
SgcbP82349 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.37■□□□□ 0.05
SgcbP82349 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SgcbP82349 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.37■□□□□ 0.05
SgcbP82349 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SgcbP82349 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
SgcbP82349 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
SgcbP82349 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.36■□□□□ 0.05
SgcbP82349 Gm15565-201ENSMUST00000118890 427 ntBASIC15.36■□□□□ 0.05
SgcbP82349 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.36■□□□□ 0.05
SgcbP82349 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SgcbP82349 Gm27463-201ENSMUST00000183569 57 ntBASIC15.36■□□□□ 0.05
SgcbP82349 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.36■□□□□ 0.05
SgcbP82349 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SgcbP82349 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SgcbP82349 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.36■□□□□ 0.05
SgcbP82349 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
SgcbP82349 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.36■□□□□ 0.05
SgcbP82349 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SgcbP82349 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SgcbP82349 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SgcbP82349 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SgcbP82349 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
SgcbP82349 Mir8112-201ENSMUST00000184382 131 ntBASIC15.35■□□□□ 0.05
SgcbP82349 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SgcbP82349 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SgcbP82349 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SgcbP82349 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.35■□□□□ 0.05
SgcbP82349 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SgcbP82349 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SgcbP82349 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SgcbP82349 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SgcbP82349 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SgcbP82349 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SgcbP82349 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SgcbP82349 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
SgcbP82349 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SgcbP82349 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.34■□□□□ 0.05
SgcbP82349 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.34■□□□□ 0.05
SgcbP82349 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.34■□□□□ 0.05
SgcbP82349 Gm37025-201ENSMUST00000195159 829 ntBASIC15.34■□□□□ 0.05
SgcbP82349 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.34■□□□□ 0.05
SgcbP82349 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.34■□□□□ 0.05
SgcbP82349 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SgcbP82349 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SgcbP82349 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SgcbP82349 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SgcbP82349 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SgcbP82349 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SgcbP82349 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.33■□□□□ 0.05
SgcbP82349 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SgcbP82349 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SgcbP82349 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SgcbP82349 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SgcbP82349 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.33■□□□□ 0.04
SgcbP82349 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SgcbP82349 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SgcbP82349 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.33■□□□□ 0.04
SgcbP82349 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SgcbP82349 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SgcbP82349 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms