Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm10013-201ENSMUST00000106074 672 ntBASIC16.92■□□□□ 0.3
Lhx1P63006 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Lhx1P63006 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lhx1P63006 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.92■□□□□ 0.3
Lhx1P63006 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Lhx1P63006 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Lhx1P63006 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.92■□□□□ 0.3
Lhx1P63006 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.92■□□□□ 0.3
Lhx1P63006 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Lhx1P63006 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx1P63006 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx1P63006 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Lhx1P63006 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.91■□□□□ 0.3
Lhx1P63006 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx1P63006 Gm18101-201ENSMUST00000215769 548 ntBASIC16.91■□□□□ 0.3
Lhx1P63006 Gm18032-201ENSMUST00000222541 538 ntBASIC16.91■□□□□ 0.3
Lhx1P63006 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.91■□□□□ 0.3
Lhx1P63006 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx1P63006 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx1P63006 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx1P63006 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx1P63006 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx1P63006 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Lhx1P63006 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.9■□□□□ 0.3
Lhx1P63006 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lhx1P63006 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.9■□□□□ 0.3
Lhx1P63006 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.9■□□□□ 0.3
Lhx1P63006 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Gm7370-201ENSMUST00000219471 767 ntBASIC16.9■□□□□ 0.3
Lhx1P63006 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Lhx1P63006 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.9■□□□□ 0.3
Lhx1P63006 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.9■□□□□ 0.3
Lhx1P63006 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx1P63006 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.9■□□□□ 0.3
Lhx1P63006 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Lhx1P63006 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Lhx1P63006 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.89■□□□□ 0.29
Lhx1P63006 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx1P63006 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lhx1P63006 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Lhx1P63006 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.89■□□□□ 0.29
Lhx1P63006 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.89■□□□□ 0.29
Lhx1P63006 Gm18958-201ENSMUST00000174258 762 ntBASIC16.89■□□□□ 0.29
Lhx1P63006 Gm22697-201ENSMUST00000175194 63 ntBASIC16.89■□□□□ 0.29
Lhx1P63006 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.89■□□□□ 0.29
Lhx1P63006 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx1P63006 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx1P63006 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx1P63006 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Lhx1P63006 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx1P63006 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx1P63006 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx1P63006 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Lhx1P63006 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.88■□□□□ 0.29
Lhx1P63006 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.88■□□□□ 0.29
Lhx1P63006 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Mir1668-201ENSMUST00000184114 107 ntBASIC16.88■□□□□ 0.29
Lhx1P63006 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lhx1P63006 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx1P63006 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx1P63006 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.87■□□□□ 0.29
Lhx1P63006 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.87■□□□□ 0.29
Lhx1P63006 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 320.1 ms