Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pfn1P62962 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pfn1P62962 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pfn1P62962 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pfn1P62962 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pfn1P62962 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pfn1P62962 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Gm27454-201ENSMUST00000185090 204 ntBASIC13.39□□□□□ -0.27
Pfn1P62962 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfn1P62962 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pfn1P62962 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.38□□□□□ -0.27
Pfn1P62962 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.38□□□□□ -0.27
Pfn1P62962 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pfn1P62962 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.38□□□□□ -0.27
Pfn1P62962 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pfn1P62962 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pfn1P62962 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pfn1P62962 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.38□□□□□ -0.27
Pfn1P62962 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pfn1P62962 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pfn1P62962 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pfn1P62962 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pfn1P62962 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfn1P62962 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.37□□□□□ -0.27
Pfn1P62962 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.37□□□□□ -0.27
Pfn1P62962 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.37□□□□□ -0.27
Pfn1P62962 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pfn1P62962 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Gm43060-201ENSMUST00000200621 289 ntBASIC13.37□□□□□ -0.27
Pfn1P62962 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.37□□□□□ -0.27
Pfn1P62962 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.37□□□□□ -0.27
Pfn1P62962 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pfn1P62962 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pfn1P62962 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pfn1P62962 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pfn1P62962 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pfn1P62962 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfn1P62962 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms