Protein–RNA interactions for Protein: P59438

Hps5, Hermansky-Pudlak syndrome 5 protein homolog, mousemouse

Predictions only

Length 1,126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps5P59438 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.27■□□□□ 0.68
Hps5P59438 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps5P59438 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps5P59438 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps5P59438 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps5P59438 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.27■□□□□ 0.68
Hps5P59438 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hps5P59438 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Hps5P59438 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps5P59438 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps5P59438 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps5P59438 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hps5P59438 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps5P59438 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hps5P59438 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps5P59438 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Hps5P59438 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps5P59438 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps5P59438 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.26■□□□□ 0.67
Hps5P59438 Gm2274-201ENSMUST00000184539 609 ntBASIC19.26■□□□□ 0.67
Hps5P59438 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps5P59438 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps5P59438 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.26■□□□□ 0.67
Hps5P59438 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hps5P59438 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hps5P59438 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hps5P59438 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.26■□□□□ 0.67
Hps5P59438 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.25■□□□□ 0.67
Hps5P59438 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hps5P59438 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps5P59438 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hps5P59438 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hps5P59438 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hps5P59438 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps5P59438 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps5P59438 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps5P59438 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hps5P59438 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.25■□□□□ 0.67
Hps5P59438 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hps5P59438 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.25■□□□□ 0.67
Hps5P59438 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.25■□□□□ 0.67
Hps5P59438 Gm6443-201ENSMUST00000203599 874 ntBASIC19.25■□□□□ 0.67
Hps5P59438 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps5P59438 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hps5P59438 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hps5P59438 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Hps5P59438 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Hps5P59438 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Hps5P59438 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps5P59438 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps5P59438 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.25■□□□□ 0.67
Hps5P59438 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hps5P59438 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.25■□□□□ 0.67
Hps5P59438 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.24■□□□□ 0.67
Hps5P59438 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Gm18669-201ENSMUST00000216049 778 ntBASIC19.24■□□□□ 0.67
Hps5P59438 Mzt1-203ENSMUST00000227948 952 ntBASIC19.24■□□□□ 0.67
Hps5P59438 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.24■□□□□ 0.67
Hps5P59438 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.24■□□□□ 0.67
Hps5P59438 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps5P59438 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hps5P59438 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Hps5P59438 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.23■□□□□ 0.67
Hps5P59438 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hps5P59438 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps5P59438 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hps5P59438 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hps5P59438 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps5P59438 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps5P59438 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps5P59438 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hps5P59438 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps5P59438 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps5P59438 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms