Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubgcp3P58854 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Tubgcp3P58854 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tubgcp3P58854 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tubgcp3P58854 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tubgcp3P58854 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tubgcp3P58854 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tubgcp3P58854 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.58■□□□□ 0.4
Tubgcp3P58854 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tubgcp3P58854 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tubgcp3P58854 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tubgcp3P58854 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.56■□□□□ 0.4
Tubgcp3P58854 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Gm15378-201ENSMUST00000121894 207 ntBASIC17.56■□□□□ 0.4
Tubgcp3P58854 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Gm10698-201ENSMUST00000182663 604 ntBASIC17.56■□□□□ 0.4
Tubgcp3P58854 Gm4974-201ENSMUST00000209974 875 ntBASIC17.56■□□□□ 0.4
Tubgcp3P58854 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tubgcp3P58854 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.55■□□□□ 0.4
Tubgcp3P58854 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Gm20760-201ENSMUST00000179197 648 ntBASIC17.55■□□□□ 0.4
Tubgcp3P58854 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Gm10517-202ENSMUST00000192970 758 ntBASIC17.55■□□□□ 0.4
Tubgcp3P58854 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tubgcp3P58854 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms