Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm1P58771 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.23■□□□□ 0.67
Tpm1P58771 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tpm1P58771 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Tpm1P58771 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.23■□□□□ 0.67
Tpm1P58771 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.23■□□□□ 0.67
Tpm1P58771 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.23■□□□□ 0.67
Tpm1P58771 Gm10493-201ENSMUST00000097270 612 ntBASIC19.23■□□□□ 0.67
Tpm1P58771 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm1P58771 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm1P58771 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm1P58771 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm1P58771 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm1P58771 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.22■□□□□ 0.67
Tpm1P58771 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Tpm1P58771 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tpm1P58771 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.22■□□□□ 0.67
Tpm1P58771 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm1P58771 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 Gm10418-201ENSMUST00000100943 576 ntBASIC19.21■□□□□ 0.67
Tpm1P58771 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 Gm29791-202ENSMUST00000207888 369 ntBASIC19.21■□□□□ 0.67
Tpm1P58771 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpm1P58771 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.21■□□□□ 0.67
Tpm1P58771 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tpm1P58771 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.2■□□□□ 0.66
Tpm1P58771 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Tpm1P58771 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpm1P58771 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm1P58771 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm1P58771 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Tpm1P58771 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.19■□□□□ 0.66
Tpm1P58771 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm1P58771 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm1P58771 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm1P58771 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.19■□□□□ 0.66
Tpm1P58771 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.19■□□□□ 0.66
Tpm1P58771 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tpm1P58771 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm1P58771 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm1P58771 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm1P58771 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.18■□□□□ 0.66
Tpm1P58771 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.18■□□□□ 0.66
Tpm1P58771 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.18■□□□□ 0.66
Tpm1P58771 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.18■□□□□ 0.66
Tpm1P58771 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Tpm1P58771 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm1P58771 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Tpm1P58771 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm1P58771 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm1P58771 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm1P58771 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms