Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp25P57080 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.48■□□□□ 0.71
Usp25P57080 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp25P57080 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Usp25P57080 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.48■□□□□ 0.71
Usp25P57080 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Usp25P57080 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp25P57080 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp25P57080 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp25P57080 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp25P57080 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp25P57080 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp25P57080 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp25P57080 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp25P57080 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp25P57080 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp25P57080 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp25P57080 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp25P57080 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp25P57080 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp25P57080 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.46■□□□□ 0.71
Usp25P57080 Mir2861-201ENSMUST00000175539 82 ntBASIC19.46■□□□□ 0.71
Usp25P57080 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.46■□□□□ 0.71
Usp25P57080 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp25P57080 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp25P57080 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp25P57080 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp25P57080 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp25P57080 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Usp25P57080 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp25P57080 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp25P57080 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp25P57080 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp25P57080 Gm2399-201ENSMUST00000104944 225 ntBASIC19.45■□□□□ 0.7
Usp25P57080 Gm27405-201ENSMUST00000184201 112 ntBASIC19.45■□□□□ 0.7
Usp25P57080 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp25P57080 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp25P57080 Zfp783-201ENSMUST00000095946 670 ntBASIC19.45■□□□□ 0.7
Usp25P57080 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp25P57080 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp25P57080 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Usp25P57080 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp25P57080 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp25P57080 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Usp25P57080 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp25P57080 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Usp25P57080 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp25P57080 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp25P57080 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp25P57080 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Usp25P57080 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp25P57080 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp25P57080 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp25P57080 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.44■□□□□ 0.7
Usp25P57080 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp25P57080 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp25P57080 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp25P57080 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Usp25P57080 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.43■□□□□ 0.7
Usp25P57080 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Usp25P57080 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp25P57080 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp25P57080 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Usp25P57080 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.42■□□□□ 0.7
Usp25P57080 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp25P57080 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms