Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf5P56477 Gm14859-201ENSMUST00000117752 357 ntBASIC20.36■□□□□ 0.85
Irf5P56477 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Irf5P56477 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.36■□□□□ 0.85
Irf5P56477 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Irf5P56477 Gm2274-201ENSMUST00000184539 609 ntBASIC20.36■□□□□ 0.85
Irf5P56477 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.36■□□□□ 0.85
Irf5P56477 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf5P56477 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.36■□□□□ 0.85
Irf5P56477 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Irf5P56477 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf5P56477 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
Irf5P56477 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.36■□□□□ 0.85
Irf5P56477 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf5P56477 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf5P56477 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf5P56477 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf5P56477 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf5P56477 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Irf5P56477 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf5P56477 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Irf5P56477 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Irf5P56477 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf5P56477 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf5P56477 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Irf5P56477 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf5P56477 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.35■□□□□ 0.85
Irf5P56477 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.35■□□□□ 0.85
Irf5P56477 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.35■□□□□ 0.85
Irf5P56477 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf5P56477 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Irf5P56477 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf5P56477 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Irf5P56477 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.34■□□□□ 0.85
Irf5P56477 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf5P56477 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Irf5P56477 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf5P56477 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Irf5P56477 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf5P56477 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf5P56477 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.33■□□□□ 0.85
Irf5P56477 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Irf5P56477 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.33■□□□□ 0.85
Irf5P56477 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.33■□□□□ 0.85
Irf5P56477 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Gm18101-201ENSMUST00000215769 548 ntBASIC20.33■□□□□ 0.85
Irf5P56477 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.33■□□□□ 0.85
Irf5P56477 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf5P56477 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf5P56477 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf5P56477 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.33■□□□□ 0.84
Irf5P56477 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Irf5P56477 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Irf5P56477 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.32■□□□□ 0.84
Irf5P56477 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Irf5P56477 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf5P56477 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf5P56477 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.31■□□□□ 0.84
Irf5P56477 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf5P56477 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Irf5P56477 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Irf5P56477 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Irf5P56477 Gm12085-201ENSMUST00000119263 940 ntBASIC20.31■□□□□ 0.84
Irf5P56477 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf5P56477 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.31■□□□□ 0.84
Irf5P56477 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Irf5P56477 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.31■□□□□ 0.84
Irf5P56477 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf5P56477 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf5P56477 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.31■□□□□ 0.84
Irf5P56477 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf5P56477 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf5P56477 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.3■□□□□ 0.84
Irf5P56477 Gm22697-201ENSMUST00000175194 63 ntBASIC20.3■□□□□ 0.84
Irf5P56477 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf5P56477 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf5P56477 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms