Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp1P56183 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp1P56183 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp1P56183 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rrp1P56183 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp1P56183 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.43■□□□□ 0.7
Rrp1P56183 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp1P56183 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.43■□□□□ 0.7
Rrp1P56183 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp1P56183 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rrp1P56183 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp1P56183 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp1P56183 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp1P56183 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp1P56183 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp1P56183 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp1P56183 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp1P56183 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.42■□□□□ 0.7
Rrp1P56183 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.42■□□□□ 0.7
Rrp1P56183 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp1P56183 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp1P56183 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp1P56183 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp1P56183 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rrp1P56183 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp1P56183 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp1P56183 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp1P56183 Gm6576-201ENSMUST00000169678 883 ntBASIC19.41■□□□□ 0.7
Rrp1P56183 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp1P56183 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp1P56183 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp1P56183 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.41■□□□□ 0.7
Rrp1P56183 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp1P56183 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp1P56183 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp1P56183 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp1P56183 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp1P56183 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rrp1P56183 Gm15375-201ENSMUST00000119510 849 ntBASIC19.4■□□□□ 0.7
Rrp1P56183 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Gm4968-201ENSMUST00000071458 858 ntBASIC19.4■□□□□ 0.7
Rrp1P56183 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.4■□□□□ 0.7
Rrp1P56183 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rrp1P56183 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp1P56183 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Rrp1P56183 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rrp1P56183 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.39■□□□□ 0.69
Rrp1P56183 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.39■□□□□ 0.69
Rrp1P56183 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp1P56183 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp1P56183 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp1P56183 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.38■□□□□ 0.69
Rrp1P56183 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp1P56183 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp1P56183 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.38■□□□□ 0.69
Rrp1P56183 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.38■□□□□ 0.69
Rrp1P56183 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.38■□□□□ 0.69
Rrp1P56183 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp1P56183 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Rrp1P56183 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp1P56183 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp1P56183 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp1P56183 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp1P56183 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rrp1P56183 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms