Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nub1P54729 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Nub1P54729 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.5■□□□□ 0.55
Nub1P54729 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.5■□□□□ 0.55
Nub1P54729 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Timm23-208ENSMUST00000226683 750 ntBASIC18.5■□□□□ 0.55
Nub1P54729 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nub1P54729 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nub1P54729 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nub1P54729 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nub1P54729 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nub1P54729 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nub1P54729 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nub1P54729 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nub1P54729 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nub1P54729 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nub1P54729 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nub1P54729 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nub1P54729 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.49■□□□□ 0.55
Nub1P54729 Gm21814-202ENSMUST00000203277 873 ntBASIC18.49■□□□□ 0.55
Nub1P54729 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.49■□□□□ 0.55
Nub1P54729 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nub1P54729 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.49■□□□□ 0.55
Nub1P54729 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nub1P54729 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nub1P54729 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nub1P54729 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nub1P54729 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.49■□□□□ 0.55
Nub1P54729 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nub1P54729 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.48■□□□□ 0.55
Nub1P54729 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Nub1P54729 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nub1P54729 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.47■□□□□ 0.55
Nub1P54729 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nub1P54729 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Gm38027-201ENSMUST00000192315 235 ntBASIC18.47■□□□□ 0.55
Nub1P54729 Gm3375-201ENSMUST00000203929 796 ntBASIC18.47■□□□□ 0.55
Nub1P54729 Odf3b-204ENSMUST00000227834 930 ntBASIC18.47■□□□□ 0.55
Nub1P54729 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.47■□□□□ 0.55
Nub1P54729 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.47■□□□□ 0.55
Nub1P54729 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Nub1P54729 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nub1P54729 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nub1P54729 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nub1P54729 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nub1P54729 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nub1P54729 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nub1P54729 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nub1P54729 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nub1P54729 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nub1P54729 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nub1P54729 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.46■□□□□ 0.55
Nub1P54729 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
Nub1P54729 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Nub1P54729 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nub1P54729 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nub1P54729 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Nub1P54729 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nub1P54729 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nub1P54729 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Nub1P54729 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nub1P54729 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms