Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn1P54254 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn1P54254 Gm11950-201ENSMUST00000121615 838 ntBASIC17.06■□□□□ 0.32
Atxn1P54254 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn1P54254 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn1P54254 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn1P54254 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn1P54254 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn1P54254 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Atxn1P54254 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.06■□□□□ 0.32
Atxn1P54254 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Atxn1P54254 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.05■□□□□ 0.32
Atxn1P54254 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Atxn1P54254 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Atxn1P54254 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Atxn1P54254 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.05■□□□□ 0.32
Atxn1P54254 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.05■□□□□ 0.32
Atxn1P54254 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Atxn1P54254 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Atxn1P54254 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.05■□□□□ 0.32
Atxn1P54254 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn1P54254 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Atxn1P54254 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn1P54254 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn1P54254 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn1P54254 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn1P54254 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.04■□□□□ 0.32
Atxn1P54254 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.04■□□□□ 0.32
Atxn1P54254 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn1P54254 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn1P54254 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn1P54254 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.04■□□□□ 0.32
Atxn1P54254 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn1P54254 Gm5864-201ENSMUST00000202263 970 ntBASIC17.04■□□□□ 0.32
Atxn1P54254 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn1P54254 Gm7791-201ENSMUST00000219066 539 ntBASIC17.04■□□□□ 0.32
Atxn1P54254 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn1P54254 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn1P54254 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.04■□□□□ 0.32
Atxn1P54254 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.04■□□□□ 0.32
Atxn1P54254 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.03■□□□□ 0.32
Atxn1P54254 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atxn1P54254 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Atxn1P54254 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Atxn1P54254 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.03■□□□□ 0.32
Atxn1P54254 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.03■□□□□ 0.32
Atxn1P54254 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Atxn1P54254 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.03■□□□□ 0.32
Atxn1P54254 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atxn1P54254 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atxn1P54254 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.03■□□□□ 0.32
Atxn1P54254 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atxn1P54254 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Atxn1P54254 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atxn1P54254 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atxn1P54254 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atxn1P54254 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atxn1P54254 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atxn1P54254 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atxn1P54254 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.02■□□□□ 0.32
Atxn1P54254 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atxn1P54254 Gm11355-201ENSMUST00000121120 306 ntBASIC17.02■□□□□ 0.32
Atxn1P54254 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.02■□□□□ 0.32
Atxn1P54254 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atxn1P54254 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.02■□□□□ 0.32
Atxn1P54254 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Atxn1P54254 Gm27742-201ENSMUST00000184667 60 ntBASIC17.02■□□□□ 0.32
Atxn1P54254 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.02■□□□□ 0.32
Atxn1P54254 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Atxn1P54254 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.02■□□□□ 0.31
Atxn1P54254 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Atxn1P54254 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atxn1P54254 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.01■□□□□ 0.31
Atxn1P54254 Gm37935-201ENSMUST00000192012 982 ntBASIC17.01■□□□□ 0.31
Atxn1P54254 Gm4974-201ENSMUST00000209974 875 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms