Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lhx4P53776 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.56□□□□□ -0.08
Lhx4P53776 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.56□□□□□ -0.08
Lhx4P53776 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx4P53776 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx4P53776 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.55□□□□□ -0.08
Lhx4P53776 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx4P53776 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx4P53776 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx4P53776 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Lhx4P53776 Gm15375-201ENSMUST00000119510 849 ntBASIC14.55□□□□□ -0.08
Lhx4P53776 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx4P53776 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.55□□□□□ -0.08
Lhx4P53776 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Lhx4P53776 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx4P53776 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx4P53776 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx4P53776 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx4P53776 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lhx4P53776 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lhx4P53776 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.54□□□□□ -0.08
Lhx4P53776 Gm10418-201ENSMUST00000100943 576 ntBASIC14.54□□□□□ -0.08
Lhx4P53776 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
Lhx4P53776 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.54□□□□□ -0.08
Lhx4P53776 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.54□□□□□ -0.08
Lhx4P53776 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Lhx4P53776 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.54□□□□□ -0.08
Lhx4P53776 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Lhx4P53776 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx4P53776 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Lhx4P53776 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Lhx4P53776 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Idnk-204ENSMUST00000226010 1898 ntBASIC14.53□□□□□ -0.08
Lhx4P53776 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Lhx4P53776 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.53□□□□□ -0.08
Lhx4P53776 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.53□□□□□ -0.08
Lhx4P53776 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Lhx4P53776 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.53□□□□□ -0.08
Lhx4P53776 Mir6982-201ENSMUST00000184354 68 ntBASIC14.53□□□□□ -0.08
Lhx4P53776 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.53□□□□□ -0.08
Lhx4P53776 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.53□□□□□ -0.08
Lhx4P53776 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx4P53776 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx4P53776 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx4P53776 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx4P53776 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx4P53776 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Lhx4P53776 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx4P53776 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx4P53776 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx4P53776 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.52□□□□□ -0.08
Lhx4P53776 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx4P53776 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Lhx4P53776 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx4P53776 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.52□□□□□ -0.09
Lhx4P53776 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.52□□□□□ -0.09
Lhx4P53776 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx4P53776 Gm8969-201ENSMUST00000199694 526 ntBASIC14.52□□□□□ -0.09
Lhx4P53776 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx4P53776 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx4P53776 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx4P53776 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms