Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdx1P52946 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pdx1P52946 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.03■□□□□ 0.32
Pdx1P52946 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pdx1P52946 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pdx1P52946 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdx1P52946 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdx1P52946 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pdx1P52946 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.02■□□□□ 0.32
Pdx1P52946 Gm7638-201ENSMUST00000121348 967 ntBASIC17.02■□□□□ 0.32
Pdx1P52946 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.02■□□□□ 0.32
Pdx1P52946 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdx1P52946 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.02■□□□□ 0.32
Pdx1P52946 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pdx1P52946 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pdx1P52946 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Pdx1P52946 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pdx1P52946 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Pdx1P52946 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.01■□□□□ 0.31
Pdx1P52946 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pdx1P52946 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pdx1P52946 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pdx1P52946 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.01■□□□□ 0.31
Pdx1P52946 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.01■□□□□ 0.31
Pdx1P52946 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.01■□□□□ 0.31
Pdx1P52946 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.01■□□□□ 0.31
Pdx1P52946 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdx1P52946 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.01■□□□□ 0.31
Pdx1P52946 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17■□□□□ 0.31
Pdx1P52946 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 Gm37025-201ENSMUST00000195159 829 ntBASIC17■□□□□ 0.31
Pdx1P52946 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17■□□□□ 0.31
Pdx1P52946 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdx1P52946 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pdx1P52946 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.99■□□□□ 0.31
Pdx1P52946 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.99■□□□□ 0.31
Pdx1P52946 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.99■□□□□ 0.31
Pdx1P52946 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Pdx1P52946 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.99■□□□□ 0.31
Pdx1P52946 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdx1P52946 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdx1P52946 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdx1P52946 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.98■□□□□ 0.31
Pdx1P52946 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdx1P52946 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.98■□□□□ 0.31
Pdx1P52946 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdx1P52946 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pdx1P52946 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdx1P52946 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdx1P52946 Gm17661-201ENSMUST00000170317 270 ntBASIC16.98■□□□□ 0.31
Pdx1P52946 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.98■□□□□ 0.31
Pdx1P52946 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdx1P52946 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdx1P52946 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdx1P52946 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Pdx1P52946 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.98■□□□□ 0.31
Pdx1P52946 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdx1P52946 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdx1P52946 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms