Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TubP50586 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TubP50586 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.64■□□□□ 0.41
TubP50586 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.64■□□□□ 0.41
TubP50586 Gm27463-201ENSMUST00000183569 57 ntBASIC17.64■□□□□ 0.41
TubP50586 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.64■□□□□ 0.41
TubP50586 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.64■□□□□ 0.41
TubP50586 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TubP50586 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TubP50586 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
TubP50586 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TubP50586 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.63■□□□□ 0.41
TubP50586 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TubP50586 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TubP50586 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.63■□□□□ 0.41
TubP50586 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TubP50586 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TubP50586 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TubP50586 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.63■□□□□ 0.41
TubP50586 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.63■□□□□ 0.41
TubP50586 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TubP50586 Gm17661-201ENSMUST00000170317 270 ntBASIC17.63■□□□□ 0.41
TubP50586 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.63■□□□□ 0.41
TubP50586 Gm9731-201ENSMUST00000209480 747 ntBASIC17.63■□□□□ 0.41
TubP50586 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TubP50586 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TubP50586 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
TubP50586 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TubP50586 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TubP50586 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.63■□□□□ 0.41
TubP50586 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TubP50586 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TubP50586 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TubP50586 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TubP50586 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TubP50586 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TubP50586 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TubP50586 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TubP50586 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.62■□□□□ 0.41
TubP50586 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.62■□□□□ 0.41
TubP50586 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.62■□□□□ 0.41
TubP50586 Gm7791-201ENSMUST00000219066 539 ntBASIC17.62■□□□□ 0.41
TubP50586 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TubP50586 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.62■□□□□ 0.41
TubP50586 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TubP50586 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TubP50586 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TubP50586 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TubP50586 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.61■□□□□ 0.41
TubP50586 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.61■□□□□ 0.41
TubP50586 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TubP50586 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.61■□□□□ 0.41
TubP50586 Gm11539-201ENSMUST00000119837 557 ntBASIC17.61■□□□□ 0.41
TubP50586 Gm13436-201ENSMUST00000120418 567 ntBASIC17.61■□□□□ 0.41
TubP50586 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TubP50586 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TubP50586 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.61■□□□□ 0.41
TubP50586 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TubP50586 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TubP50586 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TubP50586 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TubP50586 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TubP50586 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.6■□□□□ 0.41
TubP50586 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TubP50586 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.6■□□□□ 0.41
TubP50586 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TubP50586 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.6■□□□□ 0.41
TubP50586 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TubP50586 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TubP50586 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TubP50586 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TubP50586 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TubP50586 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TubP50586 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TubP50586 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms