Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Gm28659-201ENSMUST00000188013 759 ntBASIC20.65■□□□□ 0.9
Atp6v1aP50516 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atp6v1aP50516 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp6v1aP50516 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp6v1aP50516 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.64■□□□□ 0.9
Atp6v1aP50516 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Atp6v1aP50516 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.64■□□□□ 0.89
Atp6v1aP50516 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp6v1aP50516 Mir8112-201ENSMUST00000184382 131 ntBASIC20.64■□□□□ 0.89
Atp6v1aP50516 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atp6v1aP50516 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Atp6v1aP50516 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp6v1aP50516 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp6v1aP50516 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atp6v1aP50516 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp6v1aP50516 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp6v1aP50516 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atp6v1aP50516 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Atp6v1aP50516 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp6v1aP50516 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Atp6v1aP50516 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp6v1aP50516 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp6v1aP50516 Gm5864-201ENSMUST00000202263 970 ntBASIC20.63■□□□□ 0.89
Atp6v1aP50516 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp6v1aP50516 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp6v1aP50516 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp6v1aP50516 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp6v1aP50516 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp6v1aP50516 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp6v1aP50516 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Atp6v1aP50516 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp6v1aP50516 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp6v1aP50516 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp6v1aP50516 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Atp6v1aP50516 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atp6v1aP50516 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp6v1aP50516 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atp6v1aP50516 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp6v1aP50516 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.61■□□□□ 0.89
Atp6v1aP50516 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6v1aP50516 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6v1aP50516 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6v1aP50516 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6v1aP50516 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6v1aP50516 Gm27459-201ENSMUST00000184860 107 ntBASIC20.6■□□□□ 0.89
Atp6v1aP50516 Gm43514-201ENSMUST00000198852 424 ntBASIC20.6■□□□□ 0.89
Atp6v1aP50516 Gm6443-201ENSMUST00000203599 874 ntBASIC20.6■□□□□ 0.89
Atp6v1aP50516 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.6■□□□□ 0.89
Atp6v1aP50516 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6v1aP50516 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6v1aP50516 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6v1aP50516 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6v1aP50516 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1aP50516 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1aP50516 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1aP50516 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1aP50516 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1aP50516 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1aP50516 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Atp6v1aP50516 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.59■□□□□ 0.89
Atp6v1aP50516 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1aP50516 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Atp6v1aP50516 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1aP50516 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1aP50516 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1aP50516 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.58■□□□□ 0.89
Atp6v1aP50516 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp6v1aP50516 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.58■□□□□ 0.89
Atp6v1aP50516 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.58■□□□□ 0.89
Atp6v1aP50516 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.58■□□□□ 0.89
Atp6v1aP50516 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.58■□□□□ 0.89
Atp6v1aP50516 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Atp6v1aP50516 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms