Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.36■□□□□ 0.69
Brca1P48754 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.36■□□□□ 0.69
Brca1P48754 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Brca1P48754 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca1P48754 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca1P48754 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Brca1P48754 Gm27702-201ENSMUST00000184512 56 ntBASIC19.35■□□□□ 0.69
Brca1P48754 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Brca1P48754 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Brca1P48754 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca1P48754 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca1P48754 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca1P48754 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca1P48754 Gm11779-201ENSMUST00000118541 368 ntBASIC19.35■□□□□ 0.69
Brca1P48754 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.35■□□□□ 0.69
Brca1P48754 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.35■□□□□ 0.69
Brca1P48754 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.35■□□□□ 0.69
Brca1P48754 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca1P48754 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca1P48754 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca1P48754 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca1P48754 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca1P48754 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brca1P48754 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Brca1P48754 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brca1P48754 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.34■□□□□ 0.69
Brca1P48754 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brca1P48754 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brca1P48754 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brca1P48754 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Brca1P48754 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Brca1P48754 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Brca1P48754 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.33■□□□□ 0.69
Brca1P48754 Gm7063-201ENSMUST00000186840 981 ntBASIC19.33■□□□□ 0.69
Brca1P48754 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.33■□□□□ 0.69
Brca1P48754 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Brca1P48754 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Brca1P48754 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Brca1P48754 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Brca1P48754 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.32■□□□□ 0.68
Brca1P48754 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Brca1P48754 Gm8000-201ENSMUST00000188378 592 ntBASIC19.32■□□□□ 0.68
Brca1P48754 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.32■□□□□ 0.68
Brca1P48754 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brca1P48754 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brca1P48754 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brca1P48754 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brca1P48754 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.32■□□□□ 0.68
Brca1P48754 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brca1P48754 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Brca1P48754 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brca1P48754 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brca1P48754 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brca1P48754 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.32■□□□□ 0.68
Brca1P48754 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.32■□□□□ 0.68
Brca1P48754 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.32■□□□□ 0.68
Brca1P48754 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brca1P48754 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brca1P48754 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brca1P48754 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brca1P48754 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brca1P48754 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Brca1P48754 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Brca1P48754 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brca1P48754 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brca1P48754 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brca1P48754 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Brca1P48754 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.3■□□□□ 0.68
Brca1P48754 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.3■□□□□ 0.68
Brca1P48754 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.3■□□□□ 0.68
Brca1P48754 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Brca1P48754 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
Brca1P48754 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.3■□□□□ 0.68
Brca1P48754 Gm12350-201ENSMUST00000121208 462 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms