Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.56■□□□□ 0.08
Rfx3P48381 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.56■□□□□ 0.08
Rfx3P48381 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.56■□□□□ 0.08
Rfx3P48381 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Rfx3P48381 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rfx3P48381 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.55■□□□□ 0.08
Rfx3P48381 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rfx3P48381 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.55■□□□□ 0.08
Rfx3P48381 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.55■□□□□ 0.08
Rfx3P48381 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.55■□□□□ 0.08
Rfx3P48381 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Mtag2-201ENSMUST00000058665 714 ntBASIC15.55■□□□□ 0.08
Rfx3P48381 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Rfx3P48381 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Rfx3P48381 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx3P48381 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfx3P48381 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rfx3P48381 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Dio3-201ENSMUST00000097228 1449 ntBASIC15.54■□□□□ 0.08
Rfx3P48381 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.54■□□□□ 0.08
Rfx3P48381 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
Rfx3P48381 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.54■□□□□ 0.08
Rfx3P48381 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.54■□□□□ 0.08
Rfx3P48381 Gm29791-202ENSMUST00000207888 369 ntBASIC15.54■□□□□ 0.08
Rfx3P48381 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfx3P48381 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.54■□□□□ 0.08
Rfx3P48381 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx3P48381 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfx3P48381 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.53■□□□□ 0.08
Rfx3P48381 Gm12896-201ENSMUST00000118430 226 ntBASIC15.53■□□□□ 0.08
Rfx3P48381 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.53■□□□□ 0.08
Rfx3P48381 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rfx3P48381 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rfx3P48381 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Rfx3P48381 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfx3P48381 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx3P48381 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms