Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.44■□□□□ 0.54
HttP42859 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HttP42859 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HttP42859 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HttP42859 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HttP42859 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HttP42859 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.43■□□□□ 0.54
HttP42859 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HttP42859 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HttP42859 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HttP42859 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HttP42859 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HttP42859 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.43■□□□□ 0.54
HttP42859 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.43■□□□□ 0.54
HttP42859 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
HttP42859 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HttP42859 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HttP42859 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HttP42859 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HttP42859 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HttP42859 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.43■□□□□ 0.54
HttP42859 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HttP42859 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HttP42859 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HttP42859 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.42■□□□□ 0.54
HttP42859 Phf7-203ENSMUST00000226565 1971 ntBASIC18.42■□□□□ 0.54
HttP42859 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HttP42859 Gm11336-201ENSMUST00000118168 334 ntBASIC18.42■□□□□ 0.54
HttP42859 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.42■□□□□ 0.54
HttP42859 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HttP42859 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HttP42859 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HttP42859 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.42■□□□□ 0.54
HttP42859 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.42■□□□□ 0.54
HttP42859 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HttP42859 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HttP42859 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
HttP42859 Gm29791-202ENSMUST00000207888 369 ntBASIC18.41■□□□□ 0.54
HttP42859 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HttP42859 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HttP42859 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HttP42859 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HttP42859 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HttP42859 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
HttP42859 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HttP42859 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.41■□□□□ 0.54
HttP42859 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HttP42859 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.41■□□□□ 0.54
HttP42859 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HttP42859 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HttP42859 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HttP42859 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HttP42859 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HttP42859 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HttP42859 Gm15165-201ENSMUST00000118140 502 ntBASIC18.4■□□□□ 0.54
HttP42859 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HttP42859 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
HttP42859 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HttP42859 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HttP42859 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HttP42859 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HttP42859 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
HttP42859 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HttP42859 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.39■□□□□ 0.53
HttP42859 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HttP42859 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HttP42859 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.39■□□□□ 0.53
HttP42859 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HttP42859 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HttP42859 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.39■□□□□ 0.53
HttP42859 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.39■□□□□ 0.53
HttP42859 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.39■□□□□ 0.53
HttP42859 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.39■□□□□ 0.53
HttP42859 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HttP42859 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HttP42859 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HttP42859 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.38■□□□□ 0.53
HttP42859 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HttP42859 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HttP42859 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HttP42859 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HttP42859 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HttP42859 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HttP42859 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.38■□□□□ 0.53
HttP42859 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HttP42859 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.38■□□□□ 0.53
HttP42859 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HttP42859 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms