Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.26□□□□□ -0.13
Abca1P41233 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Abca1P41233 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Abca1P41233 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.25□□□□□ -0.13
Abca1P41233 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Abca1P41233 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Abca1P41233 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Abca1P41233 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Abca1P41233 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Abca1P41233 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.25□□□□□ -0.13
Abca1P41233 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Abca1P41233 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.25□□□□□ -0.13
Abca1P41233 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Abca1P41233 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Abca1P41233 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
Abca1P41233 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Abca1P41233 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.25□□□□□ -0.13
Abca1P41233 Gm7638-201ENSMUST00000121348 967 ntBASIC14.25□□□□□ -0.13
Abca1P41233 Mir5130-201ENSMUST00000175160 84 ntBASIC14.25□□□□□ -0.13
Abca1P41233 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Abca1P41233 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.25□□□□□ -0.13
Abca1P41233 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Abca1P41233 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Abca1P41233 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.24□□□□□ -0.13
Abca1P41233 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.24□□□□□ -0.13
Abca1P41233 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Abca1P41233 Gm13474-201ENSMUST00000122466 815 ntBASIC14.24□□□□□ -0.13
Abca1P41233 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Abca1P41233 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abca1P41233 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abca1P41233 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abca1P41233 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abca1P41233 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Abca1P41233 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Abca1P41233 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abca1P41233 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Abca1P41233 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.23□□□□□ -0.13
Abca1P41233 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abca1P41233 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Abca1P41233 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Abca1P41233 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abca1P41233 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abca1P41233 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abca1P41233 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abca1P41233 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abca1P41233 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.22□□□□□ -0.13
Abca1P41233 Gm21559-201ENSMUST00000220638 855 ntBASIC14.22□□□□□ -0.13
Abca1P41233 Gm8587-201ENSMUST00000076538 843 ntBASIC14.22□□□□□ -0.13
Abca1P41233 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Abca1P41233 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abca1P41233 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abca1P41233 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Abca1P41233 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abca1P41233 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Abca1P41233 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abca1P41233 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abca1P41233 Gm7153-201ENSMUST00000117092 455 ntBASIC14.22□□□□□ -0.13
Abca1P41233 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.22□□□□□ -0.13
Abca1P41233 Mir1668-201ENSMUST00000184114 107 ntBASIC14.22□□□□□ -0.13
Abca1P41233 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abca1P41233 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Abca1P41233 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abca1P41233 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Abca1P41233 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.22□□□□□ -0.13
Abca1P41233 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.21□□□□□ -0.13
Abca1P41233 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Gm29518-201ENSMUST00000190858 372 ntBASIC14.21□□□□□ -0.13
Abca1P41233 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.21□□□□□ -0.13
Abca1P41233 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.21□□□□□ -0.13
Abca1P41233 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abca1P41233 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.21□□□□□ -0.13
Abca1P41233 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms