Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VhlP40338 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.12□□□□□ -0.15
VhlP40338 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.12□□□□□ -0.15
VhlP40338 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VhlP40338 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.12□□□□□ -0.15
VhlP40338 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VhlP40338 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
VhlP40338 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VhlP40338 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.12□□□□□ -0.15
VhlP40338 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VhlP40338 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VhlP40338 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VhlP40338 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.12□□□□□ -0.15
VhlP40338 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VhlP40338 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VhlP40338 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VhlP40338 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VhlP40338 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VhlP40338 Flg-201ENSMUST00000050758 1488 ntBASIC14.12□□□□□ -0.15
VhlP40338 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VhlP40338 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
VhlP40338 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
VhlP40338 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VhlP40338 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VhlP40338 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.11□□□□□ -0.15
VhlP40338 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.11□□□□□ -0.15
VhlP40338 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
VhlP40338 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.11□□□□□ -0.15
VhlP40338 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.11□□□□□ -0.15
VhlP40338 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VhlP40338 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.11□□□□□ -0.15
VhlP40338 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VhlP40338 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VhlP40338 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
VhlP40338 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Gm13401-201ENSMUST00000117074 291 ntBASIC14.1□□□□□ -0.15
VhlP40338 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.1□□□□□ -0.15
VhlP40338 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.1□□□□□ -0.15
VhlP40338 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.1□□□□□ -0.15
VhlP40338 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VhlP40338 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VhlP40338 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VhlP40338 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.09□□□□□ -0.15
VhlP40338 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.09□□□□□ -0.15
VhlP40338 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.09□□□□□ -0.15
VhlP40338 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VhlP40338 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.09□□□□□ -0.15
VhlP40338 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.09□□□□□ -0.15
VhlP40338 Gm10033-202ENSMUST00000211874 928 ntBASIC14.09□□□□□ -0.15
VhlP40338 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VhlP40338 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VhlP40338 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms