Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.73■□□□□ 0.43
Cxcl12P40224 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cxcl12P40224 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.73■□□□□ 0.43
Cxcl12P40224 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.73■□□□□ 0.43
Cxcl12P40224 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Cxcl12P40224 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcl12P40224 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.72■□□□□ 0.43
Cxcl12P40224 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.72■□□□□ 0.43
Cxcl12P40224 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.72■□□□□ 0.43
Cxcl12P40224 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.72■□□□□ 0.43
Cxcl12P40224 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.72■□□□□ 0.43
Cxcl12P40224 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.72■□□□□ 0.43
Cxcl12P40224 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcl12P40224 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.72■□□□□ 0.43
Cxcl12P40224 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Cxcl12P40224 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cxcl12P40224 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cxcl12P40224 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Cxcl12P40224 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.71■□□□□ 0.43
Cxcl12P40224 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Rprl3-201ENSMUST00000157400 290 ntBASIC17.71■□□□□ 0.43
Cxcl12P40224 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.71■□□□□ 0.43
Cxcl12P40224 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.71■□□□□ 0.43
Cxcl12P40224 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cxcl12P40224 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cxcl12P40224 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcl12P40224 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cxcl12P40224 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.71■□□□□ 0.43
Cxcl12P40224 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cxcl12P40224 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cxcl12P40224 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.7■□□□□ 0.42
Cxcl12P40224 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cxcl12P40224 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.7■□□□□ 0.42
Cxcl12P40224 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.7■□□□□ 0.42
Cxcl12P40224 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Cxcl12P40224 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.7■□□□□ 0.42
Cxcl12P40224 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cxcl12P40224 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cxcl12P40224 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cxcl12P40224 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
Cxcl12P40224 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.69■□□□□ 0.42
Cxcl12P40224 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.69■□□□□ 0.42
Cxcl12P40224 Gm5364-201ENSMUST00000216789 889 ntBASIC17.69■□□□□ 0.42
Cxcl12P40224 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.69■□□□□ 0.42
Cxcl12P40224 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms