Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fen1P39749 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Fen1P39749 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fen1P39749 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fen1P39749 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Fen1P39749 Gm37179-201ENSMUST00000194862 823 ntBASIC17.34■□□□□ 0.37
Fen1P39749 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.34■□□□□ 0.37
Fen1P39749 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Fen1P39749 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fen1P39749 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fen1P39749 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Fen1P39749 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.34■□□□□ 0.37
Fen1P39749 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fen1P39749 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fen1P39749 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.33■□□□□ 0.37
Fen1P39749 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Fen1P39749 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fen1P39749 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fen1P39749 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.33■□□□□ 0.37
Fen1P39749 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Fen1P39749 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Fen1P39749 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Fen1P39749 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Fen1P39749 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.33■□□□□ 0.36
Fen1P39749 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.33■□□□□ 0.36
Fen1P39749 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.33■□□□□ 0.36
Fen1P39749 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fen1P39749 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Fen1P39749 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fen1P39749 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Fen1P39749 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.33■□□□□ 0.36
Fen1P39749 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fen1P39749 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fen1P39749 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fen1P39749 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fen1P39749 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fen1P39749 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fen1P39749 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Fen1P39749 Gm10033-202ENSMUST00000211874 928 ntBASIC17.32■□□□□ 0.36
Fen1P39749 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.32■□□□□ 0.36
Fen1P39749 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Fen1P39749 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fen1P39749 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Fen1P39749 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.31■□□□□ 0.36
Fen1P39749 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.31■□□□□ 0.36
Fen1P39749 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.31■□□□□ 0.36
Fen1P39749 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fen1P39749 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Fen1P39749 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Fen1P39749 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.3■□□□□ 0.36
Fen1P39749 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Fen1P39749 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.3■□□□□ 0.36
Fen1P39749 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.3■□□□□ 0.36
Fen1P39749 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Fen1P39749 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.3■□□□□ 0.36
Fen1P39749 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms