Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.95■□□□□ 0.3
HmgclP38060 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HmgclP38060 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HmgclP38060 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HmgclP38060 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HmgclP38060 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HmgclP38060 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HmgclP38060 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HmgclP38060 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HmgclP38060 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HmgclP38060 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
HmgclP38060 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HmgclP38060 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HmgclP38060 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HmgclP38060 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.94■□□□□ 0.3
HmgclP38060 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.94■□□□□ 0.3
HmgclP38060 Il3ra-202ENSMUST00000223589 738 ntBASIC16.94■□□□□ 0.3
HmgclP38060 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HmgclP38060 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HmgclP38060 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HmgclP38060 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.93■□□□□ 0.3
HmgclP38060 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.93■□□□□ 0.3
HmgclP38060 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.93■□□□□ 0.3
HmgclP38060 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.93■□□□□ 0.3
HmgclP38060 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.93■□□□□ 0.3
HmgclP38060 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.93■□□□□ 0.3
HmgclP38060 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HmgclP38060 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HmgclP38060 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.92■□□□□ 0.3
HmgclP38060 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HmgclP38060 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HmgclP38060 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.92■□□□□ 0.3
HmgclP38060 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.92■□□□□ 0.3
HmgclP38060 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HmgclP38060 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HmgclP38060 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.91■□□□□ 0.3
HmgclP38060 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HmgclP38060 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HmgclP38060 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HmgclP38060 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HmgclP38060 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms