Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RxrbP28704 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RxrbP28704 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RxrbP28704 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RxrbP28704 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RxrbP28704 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RxrbP28704 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RxrbP28704 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RxrbP28704 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RxrbP28704 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RxrbP28704 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RxrbP28704 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RxrbP28704 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RxrbP28704 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RxrbP28704 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RxrbP28704 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RxrbP28704 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.3■□□□□ 0.36
RxrbP28704 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RxrbP28704 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
RxrbP28704 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RxrbP28704 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.3■□□□□ 0.36
RxrbP28704 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.3■□□□□ 0.36
RxrbP28704 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RxrbP28704 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RxrbP28704 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.3■□□□□ 0.36
RxrbP28704 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RxrbP28704 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RxrbP28704 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RxrbP28704 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RxrbP28704 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.29■□□□□ 0.36
RxrbP28704 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RxrbP28704 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RxrbP28704 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.29■□□□□ 0.36
RxrbP28704 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RxrbP28704 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.29■□□□□ 0.36
RxrbP28704 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RxrbP28704 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RxrbP28704 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RxrbP28704 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RxrbP28704 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RxrbP28704 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RxrbP28704 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RxrbP28704 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
RxrbP28704 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.28■□□□□ 0.36
RxrbP28704 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.28■□□□□ 0.36
RxrbP28704 Gm38285-201ENSMUST00000192928 922 ntBASIC17.28■□□□□ 0.36
RxrbP28704 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.28■□□□□ 0.36
RxrbP28704 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RxrbP28704 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RxrbP28704 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RxrbP28704 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RxrbP28704 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
RxrbP28704 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RxrbP28704 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RxrbP28704 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.27■□□□□ 0.36
RxrbP28704 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.27■□□□□ 0.36
RxrbP28704 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RxrbP28704 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RxrbP28704 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RxrbP28704 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RxrbP28704 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RxrbP28704 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RxrbP28704 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RxrbP28704 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RxrbP28704 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RxrbP28704 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RxrbP28704 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RxrbP28704 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RxrbP28704 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RxrbP28704 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RxrbP28704 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RxrbP28704 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RxrbP28704 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RxrbP28704 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.26■□□□□ 0.35
RxrbP28704 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RxrbP28704 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RxrbP28704 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
RxrbP28704 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
RxrbP28704 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RxrbP28704 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RxrbP28704 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RxrbP28704 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.26■□□□□ 0.35
RxrbP28704 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.26■□□□□ 0.35
RxrbP28704 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.26■□□□□ 0.35
RxrbP28704 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RxrbP28704 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RxrbP28704 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RxrbP28704 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms