Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.36□□□□□ -0.11
Col8a2P25318 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.36□□□□□ -0.11
Col8a2P25318 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.36□□□□□ -0.11
Col8a2P25318 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col8a2P25318 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.36□□□□□ -0.11
Col8a2P25318 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col8a2P25318 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col8a2P25318 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col8a2P25318 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col8a2P25318 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col8a2P25318 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.35□□□□□ -0.11
Col8a2P25318 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col8a2P25318 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col8a2P25318 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col8a2P25318 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.35□□□□□ -0.11
Col8a2P25318 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.35□□□□□ -0.11
Col8a2P25318 Gm2274-201ENSMUST00000184539 609 ntBASIC14.35□□□□□ -0.11
Col8a2P25318 Gm45058-201ENSMUST00000205810 766 ntBASIC14.35□□□□□ -0.11
Col8a2P25318 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.35□□□□□ -0.11
Col8a2P25318 Gm9731-201ENSMUST00000209480 747 ntBASIC14.35□□□□□ -0.11
Col8a2P25318 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col8a2P25318 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.35□□□□□ -0.11
Col8a2P25318 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col8a2P25318 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.35□□□□□ -0.11
Col8a2P25318 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.35□□□□□ -0.11
Col8a2P25318 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col8a2P25318 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.35□□□□□ -0.11
Col8a2P25318 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Col8a2P25318 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.35□□□□□ -0.11
Col8a2P25318 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col8a2P25318 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col8a2P25318 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col8a2P25318 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.35□□□□□ -0.11
Col8a2P25318 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col8a2P25318 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col8a2P25318 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col8a2P25318 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.34□□□□□ -0.11
Col8a2P25318 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.34□□□□□ -0.11
Col8a2P25318 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.34□□□□□ -0.11
Col8a2P25318 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.34□□□□□ -0.11
Col8a2P25318 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col8a2P25318 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col8a2P25318 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Col8a2P25318 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col8a2P25318 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col8a2P25318 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col8a2P25318 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.33□□□□□ -0.11
Col8a2P25318 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Col8a2P25318 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col8a2P25318 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.33□□□□□ -0.12
Col8a2P25318 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Col8a2P25318 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Col8a2P25318 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Col8a2P25318 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Col8a2P25318 Gm18032-201ENSMUST00000222541 538 ntBASIC14.33□□□□□ -0.12
Col8a2P25318 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col8a2P25318 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col8a2P25318 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.32□□□□□ -0.12
Col8a2P25318 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.32□□□□□ -0.12
Col8a2P25318 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col8a2P25318 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms