Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf8P23611 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf8P23611 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf8P23611 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Irf8P23611 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf8P23611 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.56■□□□□ 0.56
Irf8P23611 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf8P23611 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Irf8P23611 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf8P23611 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.56■□□□□ 0.56
Irf8P23611 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf8P23611 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.56■□□□□ 0.56
Irf8P23611 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Irf8P23611 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf8P23611 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf8P23611 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.56■□□□□ 0.56
Irf8P23611 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf8P23611 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf8P23611 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Irf8P23611 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Irf8P23611 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Irf8P23611 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Irf8P23611 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Irf8P23611 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.55■□□□□ 0.56
Irf8P23611 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.55■□□□□ 0.56
Irf8P23611 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.55■□□□□ 0.56
Irf8P23611 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Irf8P23611 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.55■□□□□ 0.56
Irf8P23611 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Irf8P23611 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Irf8P23611 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.55■□□□□ 0.56
Irf8P23611 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.55■□□□□ 0.56
Irf8P23611 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Irf8P23611 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf8P23611 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Irf8P23611 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Irf8P23611 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf8P23611 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf8P23611 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Irf8P23611 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Irf8P23611 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.54■□□□□ 0.56
Irf8P23611 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf8P23611 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf8P23611 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf8P23611 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Irf8P23611 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf8P23611 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf8P23611 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Irf8P23611 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.53■□□□□ 0.56
Irf8P23611 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf8P23611 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf8P23611 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf8P23611 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.53■□□□□ 0.56
Irf8P23611 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Irf8P23611 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf8P23611 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf8P23611 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf8P23611 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf8P23611 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf8P23611 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Irf8P23611 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf8P23611 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf8P23611 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf8P23611 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf8P23611 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf8P23611 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.52■□□□□ 0.56
Irf8P23611 Gm11539-201ENSMUST00000119837 557 ntBASIC18.52■□□□□ 0.56
Irf8P23611 Gm13436-201ENSMUST00000120418 567 ntBASIC18.52■□□□□ 0.56
Irf8P23611 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Irf8P23611 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Irf8P23611 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Irf8P23611 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Irf8P23611 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf8P23611 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.51■□□□□ 0.55
Irf8P23611 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf8P23611 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf8P23611 Gm13559-201ENSMUST00000120476 863 ntBASIC18.51■□□□□ 0.55
Irf8P23611 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.51■□□□□ 0.55
Irf8P23611 Gm27000-201ENSMUST00000182943 842 ntBASIC18.51■□□□□ 0.55
Irf8P23611 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf8P23611 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf8P23611 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms