Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.49■□□□□ 0.23
BdnfP21237 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.49■□□□□ 0.23
BdnfP21237 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
BdnfP21237 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.49■□□□□ 0.23
BdnfP21237 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
BdnfP21237 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.49■□□□□ 0.23
BdnfP21237 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.49■□□□□ 0.23
BdnfP21237 Mtag2-201ENSMUST00000058665 714 ntBASIC16.49■□□□□ 0.23
BdnfP21237 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.49■□□□□ 0.23
BdnfP21237 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
BdnfP21237 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.49■□□□□ 0.23
BdnfP21237 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BdnfP21237 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BdnfP21237 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.48■□□□□ 0.23
BdnfP21237 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BdnfP21237 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BdnfP21237 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BdnfP21237 Gm11927-201ENSMUST00000118472 759 ntBASIC16.48■□□□□ 0.23
BdnfP21237 Gm12933-201ENSMUST00000120203 872 ntBASIC16.48■□□□□ 0.23
BdnfP21237 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BdnfP21237 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.48■□□□□ 0.23
BdnfP21237 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.48■□□□□ 0.23
BdnfP21237 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.48■□□□□ 0.23
BdnfP21237 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.48■□□□□ 0.23
BdnfP21237 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.48■□□□□ 0.23
BdnfP21237 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
BdnfP21237 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BdnfP21237 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BdnfP21237 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BdnfP21237 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.48■□□□□ 0.23
BdnfP21237 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BdnfP21237 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BdnfP21237 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BdnfP21237 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
BdnfP21237 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
BdnfP21237 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.47■□□□□ 0.23
BdnfP21237 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
BdnfP21237 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BdnfP21237 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BdnfP21237 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BdnfP21237 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BdnfP21237 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.46■□□□□ 0.23
BdnfP21237 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BdnfP21237 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BdnfP21237 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BdnfP21237 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BdnfP21237 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BdnfP21237 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
BdnfP21237 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.46■□□□□ 0.23
BdnfP21237 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BdnfP21237 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BdnfP21237 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
BdnfP21237 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
BdnfP21237 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BdnfP21237 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BdnfP21237 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BdnfP21237 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BdnfP21237 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
BdnfP21237 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.45■□□□□ 0.22
BdnfP21237 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BdnfP21237 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.45■□□□□ 0.22
BdnfP21237 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BdnfP21237 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.45■□□□□ 0.22
BdnfP21237 Gm13401-201ENSMUST00000117074 291 ntBASIC16.45■□□□□ 0.22
BdnfP21237 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.45■□□□□ 0.22
BdnfP21237 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BdnfP21237 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BdnfP21237 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BdnfP21237 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BdnfP21237 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
BdnfP21237 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BdnfP21237 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BdnfP21237 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms