Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Hmga1P17095 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Hmga1P17095 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Hmga1P17095 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Hmga1P17095 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hmga1P17095 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.6■□□□□ 0.41
Hmga1P17095 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.6■□□□□ 0.41
Hmga1P17095 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Hmga1P17095 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.59■□□□□ 0.41
Hmga1P17095 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.59■□□□□ 0.41
Hmga1P17095 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.59■□□□□ 0.41
Hmga1P17095 Gm8969-201ENSMUST00000199694 526 ntBASIC17.59■□□□□ 0.41
Hmga1P17095 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hmga1P17095 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmga1P17095 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hmga1P17095 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmga1P17095 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hmga1P17095 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.58■□□□□ 0.41
Hmga1P17095 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmga1P17095 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmga1P17095 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hmga1P17095 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.58■□□□□ 0.41
Hmga1P17095 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmga1P17095 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hmga1P17095 Gm37722-201ENSMUST00000193757 208 ntBASIC17.58■□□□□ 0.4
Hmga1P17095 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hmga1P17095 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmga1P17095 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmga1P17095 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmga1P17095 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmga1P17095 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hmga1P17095 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmga1P17095 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmga1P17095 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.58■□□□□ 0.4
Hmga1P17095 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.58■□□□□ 0.4
Hmga1P17095 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmga1P17095 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmga1P17095 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmga1P17095 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmga1P17095 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Hmga1P17095 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Hmga1P17095 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.57■□□□□ 0.4
Hmga1P17095 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.57■□□□□ 0.4
Hmga1P17095 Gm17808-201ENSMUST00000200859 894 ntBASIC17.57■□□□□ 0.4
Hmga1P17095 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.57■□□□□ 0.4
Hmga1P17095 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hmga1P17095 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Hmga1P17095 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hmga1P17095 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmga1P17095 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmga1P17095 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmga1P17095 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmga1P17095 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Hmga1P17095 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Hmga1P17095 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Gm7284-201ENSMUST00000131667 944 ntBASIC17.56■□□□□ 0.4
Hmga1P17095 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Hmga1P17095 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.56■□□□□ 0.4
Hmga1P17095 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hmga1P17095 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmga1P17095 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmga1P17095 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmga1P17095 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmga1P17095 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmga1P17095 Gm27704-201ENSMUST00000185094 107 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms