Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp53P15975 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp53P15975 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp53P15975 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp53P15975 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Usp53P15975 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp53P15975 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
Usp53P15975 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Usp53P15975 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp53P15975 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Usp53P15975 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp53P15975 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Usp53P15975 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp53P15975 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp53P15975 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Usp53P15975 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Usp53P15975 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp53P15975 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp53P15975 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp53P15975 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp53P15975 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
Usp53P15975 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Usp53P15975 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.89■□□□□ 0.77
Usp53P15975 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp53P15975 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Usp53P15975 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Usp53P15975 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.89■□□□□ 0.77
Usp53P15975 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp53P15975 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp53P15975 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp53P15975 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp53P15975 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp53P15975 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp53P15975 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Usp53P15975 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Usp53P15975 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.88■□□□□ 0.77
Usp53P15975 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.88■□□□□ 0.77
Usp53P15975 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Usp53P15975 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Usp53P15975 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.88■□□□□ 0.77
Usp53P15975 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Usp53P15975 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.88■□□□□ 0.77
Usp53P15975 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Usp53P15975 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp53P15975 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Usp53P15975 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp53P15975 Gm21559-201ENSMUST00000220638 855 ntBASIC19.87■□□□□ 0.77
Usp53P15975 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Gm8587-201ENSMUST00000076538 843 ntBASIC19.87■□□□□ 0.77
Usp53P15975 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp53P15975 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp53P15975 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp53P15975 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp53P15975 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp53P15975 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp53P15975 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp53P15975 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp53P15975 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Usp53P15975 Mir1668-201ENSMUST00000184114 107 ntBASIC19.86■□□□□ 0.77
Usp53P15975 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp53P15975 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp53P15975 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp53P15975 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp53P15975 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Usp53P15975 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Usp53P15975 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp53P15975 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Usp53P15975 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.85■□□□□ 0.77
Usp53P15975 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 AA414768-201ENSMUST00000121924 1257 ntBASIC19.85■□□□□ 0.77
Usp53P15975 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.85■□□□□ 0.77
Usp53P15975 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 Gm18958-201ENSMUST00000174258 762 ntBASIC19.85■□□□□ 0.77
Usp53P15975 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 Gm6345-202ENSMUST00000180900 204 ntBASIC19.85■□□□□ 0.77
Usp53P15975 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms