Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fn1P11276 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fn1P11276 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.23□□□□□ -0.29
Fn1P11276 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fn1P11276 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fn1P11276 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fn1P11276 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fn1P11276 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fn1P11276 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.23□□□□□ -0.29
Fn1P11276 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fn1P11276 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Fn1P11276 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Fn1P11276 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.22□□□□□ -0.29
Fn1P11276 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.22□□□□□ -0.29
Fn1P11276 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fn1P11276 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Fn1P11276 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.22□□□□□ -0.29
Fn1P11276 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.21□□□□□ -0.29
Fn1P11276 Gm29791-202ENSMUST00000207888 369 ntBASIC13.21□□□□□ -0.29
Fn1P11276 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.21□□□□□ -0.29
Fn1P11276 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.21□□□□□ -0.29
Fn1P11276 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Fn1P11276 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 AA543401-201ENSMUST00000164248 1269 ntBASIC13.21□□□□□ -0.29
Fn1P11276 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Fn1P11276 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fn1P11276 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Fn1P11276 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fn1P11276 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fn1P11276 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Fn1P11276 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Fn1P11276 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fn1P11276 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Fn1P11276 Gm13418-201ENSMUST00000119097 944 ntBASIC13.2□□□□□ -0.3
Fn1P11276 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Gm5745-201ENSMUST00000183748 313 ntBASIC13.2□□□□□ -0.3
Fn1P11276 Gm8396-201ENSMUST00000057361 823 ntBASIC13.2□□□□□ -0.3
Fn1P11276 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.2□□□□□ -0.3
Fn1P11276 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.2□□□□□ -0.3
Fn1P11276 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Fn1P11276 Gm27628-201ENSMUST00000184911 107 ntBASIC13.2□□□□□ -0.3
Fn1P11276 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.2□□□□□ -0.3
Fn1P11276 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.2□□□□□ -0.3
Fn1P11276 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Gm15590-201ENSMUST00000078419 552 ntBASIC13.2□□□□□ -0.3
Fn1P11276 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.2□□□□□ -0.3
Fn1P11276 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Fn1P11276 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Fn1P11276 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fn1P11276 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fn1P11276 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fn1P11276 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fn1P11276 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms