Protein–RNA interactions for Protein: P0CB42

Alkbh1, Nucleic acid dioxygenase ALKBH1, mousemouse

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alkbh1P0CB42 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.38■□□□□ 0.53
Alkbh1P0CB42 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alkbh1P0CB42 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Alkbh1P0CB42 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alkbh1P0CB42 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alkbh1P0CB42 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alkbh1P0CB42 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alkbh1P0CB42 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Alkbh1P0CB42 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.38■□□□□ 0.53
Alkbh1P0CB42 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.38■□□□□ 0.53
Alkbh1P0CB42 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Gm9731-201ENSMUST00000209480 747 ntBASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alkbh1P0CB42 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alkbh1P0CB42 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alkbh1P0CB42 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alkbh1P0CB42 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Alkbh1P0CB42 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alkbh1P0CB42 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alkbh1P0CB42 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alkbh1P0CB42 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alkbh1P0CB42 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alkbh1P0CB42 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alkbh1P0CB42 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.33■□□□□ 0.53
Alkbh1P0CB42 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Alkbh1P0CB42 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Alkbh1P0CB42 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Alkbh1P0CB42 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.33■□□□□ 0.52
Alkbh1P0CB42 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Alkbh1P0CB42 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms