Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Mir8112-201ENSMUST00000184382 131 ntBASIC11.9□□□□□ -0.5
Smim1P0C8K7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim1P0C8K7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smim1P0C8K7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smim1P0C8K7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smim1P0C8K7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Smim1P0C8K7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.89□□□□□ -0.51
Smim1P0C8K7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim1P0C8K7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smim1P0C8K7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms