Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa9P09631 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Hoxa9P09631 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa9P09631 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa9P09631 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Hoxa9P09631 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa9P09631 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxa9P09631 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.28■□□□□ 0.36
Hoxa9P09631 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa9P09631 Gm29518-201ENSMUST00000190858 372 ntBASIC17.28■□□□□ 0.36
Hoxa9P09631 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa9P09631 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxa9P09631 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa9P09631 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa9P09631 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxa9P09631 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.28■□□□□ 0.36
Hoxa9P09631 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa9P09631 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa9P09631 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa9P09631 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxa9P09631 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa9P09631 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.27■□□□□ 0.36
Hoxa9P09631 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa9P09631 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa9P09631 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa9P09631 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.27■□□□□ 0.36
Hoxa9P09631 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.27■□□□□ 0.36
Hoxa9P09631 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa9P09631 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa9P09631 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxa9P09631 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxa9P09631 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxa9P09631 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxa9P09631 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa9P09631 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa9P09631 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa9P09631 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa9P09631 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa9P09631 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa9P09631 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa9P09631 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa9P09631 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa9P09631 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Hoxa9P09631 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa9P09631 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa9P09631 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.25■□□□□ 0.35
Hoxa9P09631 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Hoxa9P09631 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hoxa9P09631 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hoxa9P09631 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.25■□□□□ 0.35
Hoxa9P09631 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hoxa9P09631 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hoxa9P09631 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hoxa9P09631 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Hoxa9P09631 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa9P09631 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.25■□□□□ 0.35
Hoxa9P09631 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hoxa9P09631 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.24■□□□□ 0.35
Hoxa9P09631 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.24■□□□□ 0.35
Hoxa9P09631 Gm26039-201ENSMUST00000158152 144 ntBASIC17.24■□□□□ 0.35
Hoxa9P09631 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.24■□□□□ 0.35
Hoxa9P09631 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
Hoxa9P09631 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.24■□□□□ 0.35
Hoxa9P09631 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa9P09631 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hoxa9P09631 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hoxa9P09631 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa9P09631 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa9P09631 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa9P09631 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Hoxa9P09631 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Hoxa9P09631 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa9P09631 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa9P09631 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa9P09631 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hoxa9P09631 Gm17808-201ENSMUST00000200859 894 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms