Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
PdgfrbP05622 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PdgfrbP05622 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PdgfrbP05622 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PdgfrbP05622 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PdgfrbP05622 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PdgfrbP05622 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PdgfrbP05622 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PdgfrbP05622 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PdgfrbP05622 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.38■□□□□ 0.37
PdgfrbP05622 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.38■□□□□ 0.37
PdgfrbP05622 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.38■□□□□ 0.37
PdgfrbP05622 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
PdgfrbP05622 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PdgfrbP05622 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PdgfrbP05622 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PdgfrbP05622 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PdgfrbP05622 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.38■□□□□ 0.37
PdgfrbP05622 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PdgfrbP05622 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PdgfrbP05622 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.38■□□□□ 0.37
PdgfrbP05622 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PdgfrbP05622 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.38■□□□□ 0.37
PdgfrbP05622 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.37■□□□□ 0.37
PdgfrbP05622 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PdgfrbP05622 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.37■□□□□ 0.37
PdgfrbP05622 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PdgfrbP05622 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PdgfrbP05622 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PdgfrbP05622 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PdgfrbP05622 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PdgfrbP05622 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PdgfrbP05622 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.36■□□□□ 0.37
PdgfrbP05622 Gm715-201ENSMUST00000117865 831 ntBASIC17.36■□□□□ 0.37
PdgfrbP05622 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PdgfrbP05622 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PdgfrbP05622 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PdgfrbP05622 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PdgfrbP05622 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PdgfrbP05622 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PdgfrbP05622 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PdgfrbP05622 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PdgfrbP05622 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.35■□□□□ 0.37
PdgfrbP05622 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PdgfrbP05622 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PdgfrbP05622 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PdgfrbP05622 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PdgfrbP05622 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.35■□□□□ 0.37
PdgfrbP05622 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.35■□□□□ 0.37
PdgfrbP05622 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PdgfrbP05622 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PdgfrbP05622 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PdgfrbP05622 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PdgfrbP05622 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PdgfrbP05622 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PdgfrbP05622 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PdgfrbP05622 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PdgfrbP05622 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PdgfrbP05622 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PdgfrbP05622 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PdgfrbP05622 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.34■□□□□ 0.37
PdgfrbP05622 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.34■□□□□ 0.37
PdgfrbP05622 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.34■□□□□ 0.37
PdgfrbP05622 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.34■□□□□ 0.37
PdgfrbP05622 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PdgfrbP05622 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.34■□□□□ 0.37
PdgfrbP05622 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PdgfrbP05622 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PdgfrbP05622 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PdgfrbP05622 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PdgfrbP05622 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms