Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cd74P04441 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.48□□□□□ -0.09
Cd74P04441 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd74P04441 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cd74P04441 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cd74P04441 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Gm715-201ENSMUST00000117865 831 ntBASIC14.47□□□□□ -0.09
Cd74P04441 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cd74P04441 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Cd74P04441 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.47□□□□□ -0.09
Cd74P04441 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.47□□□□□ -0.09
Cd74P04441 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cd74P04441 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cd74P04441 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.47□□□□□ -0.09
Cd74P04441 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd74P04441 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cd74P04441 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cd74P04441 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Cd74P04441 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.46□□□□□ -0.09
Cd74P04441 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Cd74P04441 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.46□□□□□ -0.09
Cd74P04441 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.46□□□□□ -0.09
Cd74P04441 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.46□□□□□ -0.09
Cd74P04441 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd74P04441 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cd74P04441 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.46□□□□□ -0.1
Cd74P04441 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cd74P04441 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.46□□□□□ -0.1
Cd74P04441 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cd74P04441 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cd74P04441 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Cd74P04441 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.45□□□□□ -0.1
Cd74P04441 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.45□□□□□ -0.1
Cd74P04441 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd74P04441 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cd74P04441 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cd74P04441 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd74P04441 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms