Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
P04224 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.16■□□□□ 0.02
P04224 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04224 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
P04224 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
P04224 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.15■□□□□ 0.02
P04224 Reep4-203ENSMUST00000226563 1444 ntBASIC15.15■□□□□ 0.02
P04224 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.15■□□□□ 0.02
P04224 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04224 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.14■□□□□ 0.01
P04224 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.14■□□□□ 0.01
P04224 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
P04224 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
P04224 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04224 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
P04224 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
P04224 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
P04224 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04224 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04224 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04224 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
P04224 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04224 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04224 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
P04224 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
P04224 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
P04224 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04224 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04224 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04224 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.13■□□□□ 0.01
P04224 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04224 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
P04224 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
P04224 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04224 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04224 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
P04224 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
P04224 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04224 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
P04224 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.12■□□□□ 0.01
P04224 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
P04224 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04224 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.12■□□□□ 0.01
P04224 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04224 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04224 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.12■□□□□ 0.01
P04224 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
P04224 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04224 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.11■□□□□ 0.01
P04224 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
P04224 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04224 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04224 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04224 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04224 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.11■□□□□ 0.01
P04224 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.11■□□□□ 0.01
P04224 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.11■□□□□ 0.01
P04224 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04224 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
P04224 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04224 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
P04224 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04224 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04224 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms