Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 AW822252-206ENSMUST00000208904 237 ntBASIC21.19■□□□□ 0.98
Col4a1P02463 Mzt1-203ENSMUST00000227948 952 ntBASIC21.19■□□□□ 0.98
Col4a1P02463 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.19■□□□□ 0.98
Col4a1P02463 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a1P02463 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a1P02463 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.18■□□□□ 0.98
Col4a1P02463 Gm18421-201ENSMUST00000204122 625 ntBASIC21.18■□□□□ 0.98
Col4a1P02463 Birc2-201ENSMUST00000054878 378 ntBASIC21.18■□□□□ 0.98
Col4a1P02463 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a1P02463 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a1P02463 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.18■□□□□ 0.98
Col4a1P02463 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Col4a1P02463 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a1P02463 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.18■□□□□ 0.98
Col4a1P02463 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a1P02463 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a1P02463 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a1P02463 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.18■□□□□ 0.98
Col4a1P02463 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a1P02463 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.18■□□□□ 0.98
Col4a1P02463 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.18■□□□□ 0.98
Col4a1P02463 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a1P02463 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a1P02463 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a1P02463 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a1P02463 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col4a1P02463 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.17■□□□□ 0.98
Col4a1P02463 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.17■□□□□ 0.98
Col4a1P02463 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a1P02463 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21.17■□□□□ 0.98
Col4a1P02463 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.17■□□□□ 0.98
Col4a1P02463 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a1P02463 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.17■□□□□ 0.98
Col4a1P02463 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Col4a1P02463 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a1P02463 Gm13884-201ENSMUST00000118103 829 ntBASIC21.16■□□□□ 0.98
Col4a1P02463 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a1P02463 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Col4a1P02463 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a1P02463 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a1P02463 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Col4a1P02463 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a1P02463 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.15■□□□□ 0.98
Col4a1P02463 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.15■□□□□ 0.98
Col4a1P02463 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.15■□□□□ 0.98
Col4a1P02463 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.15■□□□□ 0.98
Col4a1P02463 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.15■□□□□ 0.98
Col4a1P02463 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 Gm12895-201ENSMUST00000122214 226 ntBASIC21.15■□□□□ 0.98
Col4a1P02463 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.15■□□□□ 0.98
Col4a1P02463 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.15■□□□□ 0.98
Col4a1P02463 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Col4a1P02463 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Col4a1P02463 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Col4a1P02463 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Col4a1P02463 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a1P02463 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col4a1P02463 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col4a1P02463 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col4a1P02463 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a1P02463 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.14■□□□□ 0.97
Col4a1P02463 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a1P02463 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a1P02463 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.14■□□□□ 0.97
Col4a1P02463 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.14■□□□□ 0.97
Col4a1P02463 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a1P02463 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.14■□□□□ 0.97
Col4a1P02463 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a1P02463 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a1P02463 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a1P02463 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a1P02463 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a1P02463 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a1P02463 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC21.13■□□□□ 0.97
Col4a1P02463 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.13■□□□□ 0.97
Col4a1P02463 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a1P02463 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC21.13■□□□□ 0.97
Col4a1P02463 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.13■□□□□ 0.97
Col4a1P02463 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a1P02463 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a1P02463 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Col4a1P02463 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a1P02463 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms